Sleipnir: tools/Mat2Txt/Mat2Txt.cpp Source File

00001 /*****************************************************************************
00002 * This file is provided under the Creative Commons Attribution 3.0 license.
00003 *
00004 * You are free to share, copy, distribute, transmit, or adapt this work
00005 * PROVIDED THAT you attribute the work to the authors listed below.
00006 * For more information, please see the following web page:
00007 * http://creativecommons.org/licenses/by/3.0/
00008 *
00009 * This file is a component of the Sleipnir library for functional genomics,
00010 * authored by:
00011 * Curtis Huttenhower (chuttenh@princeton.edu)
00012 * Mark Schroeder
00013 * Maria D. Chikina
00014 * Olga G. Troyanskaya (ogt@princeton.edu, primary contact)
00015 *
00016 * If you use this library, the included executable tools, or any related
00017 * code in your work, please cite the following publication:
00018 * Curtis Huttenhower, Mark Schroeder, Maria D. Chikina, and
00019 * Olga G. Troyanskaya.
00020 * "The Sleipnir library for computational functional genomics"
00021 *****************************************************************************/
00022 #include "stdafx.h"
00023 #include "cmdline.h"
00024 
00025 int main( int iArgs, char** aszArgs ) {
00026     gengetopt_args_info sArgs;
00027     CDataMatrix         Mat;
00028 
00029     if( cmdline_parser( iArgs, aszArgs, &sArgs ) ) {
00030         cmdline_parser_print_help( );
00031         return 1; }
00032     CMeta Meta( sArgs.verbosity_arg );
00033 
00034     if( !Mat.Open( sArgs.input_arg ) ) {
00035         cerr << "Could not open: " << ( sArgs.input_arg ? sArgs.input_arg : "stdin" ) << endl;
00036         return 1; }
00037     Mat.Save( sArgs.output_arg );
00038 
00039     return 0; }