Usage
Basic Usage
SeekAggregatedDataset ...
Detailed Usage
package "SeekAggregatedDataset"
version "1.0"
purpose "Search based on correlation of aggregated dataset"
section "Mode"
option "pcl" e "PCL mode, suitable for dataset gene variance calculation"
flag off
section "PCL mode"
option "pcl_list" V "PCL list"
string typestr="filename"
option "pcl_dir" F "PCL directory"
string typestr="directory"
section "Input"
option "input" i "Gene mapping file"
string typestr="filename" yes
option "query" q "Query file"
string typestr="filename" yes
section "Output"
option "dir_out" D "Output directory"
string typestr="directory"
| Flag | Default | Type | Description |
| -i | stdin | Text file | Tab-delimited text file containing two columns, numerical gene IDs (one-based) and unique gene names (matching those in the input DAT/DAB files). |
