Sleipnir
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00001 /***************************************************************************** 00002 * This file is provided under the Creative Commons Attribution 3.0 license. 00003 * 00004 * You are free to share, copy, distribute, transmit, or adapt this work 00005 * PROVIDED THAT you attribute the work to the authors listed below. 00006 * For more information, please see the following web page: 00007 * http://creativecommons.org/licenses/by/3.0/ 00008 * 00009 * This file is a component of the Sleipnir library for functional genomics, 00010 * authored by: 00011 * Curtis Huttenhower (chuttenh@princeton.edu) 00012 * Mark Schroeder 00013 * Maria D. Chikina 00014 * Olga G. Troyanskaya (ogt@princeton.edu, primary contact) 00015 * 00016 * If you use this library, the included executable tools, or any related 00017 * code in your work, please cite the following publication: 00018 * Curtis Huttenhower, Mark Schroeder, Maria D. Chikina, and 00019 * Olga G. Troyanskaya. 00020 * "The Sleipnir library for computational functional genomics" 00021 *****************************************************************************/ 00022 #ifndef STDAFX_H 00023 #define STDAFX_H 00024 00025 #define __STDC_LIMIT_MACROS 00026 00027 #include <fstream> 00028 #include <iostream> 00029 #include <map> 00030 #include <string> 00031 #include <omp.h> 00032 using namespace std; 00033 00034 #include <pthread.h> 00035 00036 #include "seekmap.h" 00037 #include "seekweight.h" 00038 #include "seekdataset.h" 00039 #include "seekevaluate.h" 00040 #include "seekplatform.h" 00041 #include "seekreader.h" 00042 #include "seekwriter.h" 00043 #include "seekquery.h" 00044 #include "meta.h" 00045 #include "unistd.h" 00046 00047 using namespace Sleipnir; 00048 00049 #endif // STDAFX_H